German conference on bioinformatics 2005 (GCB 2005), 5.-7. October 2005, Hamburg, Germany

Gesellschaft für Informatik, Bonn
2005

Contents

Articles

• Peter Schuster
  Invited talk: landscapes in RNA folding and evolution
  Pages: 1... Full Text
• Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H. Bernhart, Peter F. Stadler, Ivo L. Hofacker
  Thermodynamics of RNA-RNA binding
  Pages: 3-13... Full Text
• Ivo L. Hofacker, Peter F. Stadler
  Memory efficient folding algorithms for circular RNA secondary structures
  Pages: 15-25... Full Text
• Tom Slezak
  Invited talk: A large-scale application of comparative genomics for biodefense
  Pages: 27... Full Text
• Christian Wawra, Mohamed I. Abouelhoda, Enno Ohlebusch
  Efficient mapping of large cdna/EST databases to genomes: A comparison of two different strategies
  Pages: 29-43... Full Text
• Annette Höglund, Pierre Dönnes, Torsten Blum, Hans-Werner Adolph, Oliver Kohlbacher
  Using N-terminal targeting sequences, amino acid composition, and sequence motifs for predicting protein subcellular localization
  Pages: 45-59... Full Text
• Guo-Ping Zhao
  Invited talk: SARS molecular epidemiology and SARS-cov evolution: combating an emerging infectious disease with the regimen of genomics and bioinformatics
  Pages: 61... Full Text
• Alexander Kel, Tatiana Konovalova, Tagir Valeev, Evgeny Cheremushkin, Olga Kel-Margoulis, Edgar Wingender
  Composite module analyst: A fitness-based tool for prediction of transcription regulation
  Pages: 63-75... Full Text
• Katrin Fundel, Robert Küffner, Thomas Aigner, Ralf Zimmer
  Data processing effects on the interpretation of microarray gene expression experiments
  Pages: 77-91... Full Text
• Alexey V. Antonov, Igor V. Tetko, Denis Kosykh, Dmitrij Surmeli, Hans-Wernermewes
  Exploiting scale-free information from expression data for cancer classification
  Pages: 93-102... Full Text
• Rolf Hilgenfeld
  Invited talk: proteins of SARS coronavirus - experimental and theoretical studies
  Pages: 103-104... Full Text
• Jean-Christophe Nebel
  Generation of 3D templates of active sites of proteins with rigid prosthetic groups
  Pages: 105-118... Full Text
• Axel Griewel, Matthias Rarey
  From greedy to branch \& bound and back: assessing optimization strategies forincremental construction molecular docking tools
  Pages: 119-130... Full Text
• Li Jin
  Invited talk: linkage disequilibrium sharing and tagsnp portability between populations
  Pages: 131... Full Text
• Hannes Luz, Martin Vingron
  Family specific rates of protein evolution
  Pages: 133-144... Full Text
• David A. Case
  Invited talk: macromolecular simulations using continuum solvent models
  Pages: 145... Full Text
• Alexander Seifert, Michael Krahn, Stephan Tatzel, Rolf D. Schmid, Jürgen Pleiss
  A model of specificity and selectivity of mammalian cytochrome P450 monooxygenases
  Pages: 147-157... Full Text
• Bingding Huang, Michael Schroeder
  Using residue propensities and tightness of fit to improve rigid-body protein-protein docking
  Pages: 159-173... Full Text
• Hugo Kubinyi
  Invited talk: chemistry meets biology: chemogenomics in drug discovery
  Pages: 175... Full Text
• Ari Rantanen, Taneli Mielikäinen, Juho Rousu, Esko Ukkonen
  Planning isotopomer measurements for estimation of metabolic fluxes
  Pages: 177-191... Full Text
• Christian Spieth, Felix Streichertn, Nora Speern, Andreas Zell
  Inferring regulatory systems with noisy pathway information
  Pages: 193-202... Full Text

Gesellschaft für Informatik, Bonn
ISBN 3-88579-400-4