German conference on bioinformatics

Gesellschaft für Informatik, Bonn
2008

Contents

Articles

• Alexey Antonov, Sabine Dietmann, Hans-Werner Mewes
  Consecutive KEGG pathway models for the interpretation of high-throughput genomics data
  Pages: 1-9... Full Text
• Stephan Symons, Kirstin Weber, Michael Bonin, Kay Nieselt
  Resqmi - aversatile algorithm and software for resequencing microarrays
  Pages: 10-20... Full Text
• Nicolas Goffard, Tancred Frickey, Nijat Imin, Georg Weiller
  Exploring the enzyme neighbourhood to interpret gene expression data
  Pages: 21-29... Full Text
• Caroline C. Friedel, Ralf Zimmer
  Identifying the topology of protein complexes from affinity purification assays
  Pages: 30-43... Full Text
• Thomas Fober, Eyke Huellermeier, Marco Mernberger
  Evolutionary construction of multiple graph alignments for the structural analysis of biomolecules
  Pages: 44-53... Full Text
• Oron Vanunu, Roded Sharan
  A propagation-based algorithm for inferring gene-disease assocations
  Pages: 54-63... Full Text
• Susanne Eyrisch, Volkhard Helms
  Designing binding pockets on protein surfaces using the A* algorithm
  Pages: 64-74... Full Text
• Florian Teichert, Ugo Bastolla, Markus Porto
  Protein structure alignment through a contact topology profile using SABERTOOTH
  Pages: 75-84... Full Text
• Martin Strauch, Giovanni Galizia
  Registration to a neuroanatomical reference atlas - identifying glomeruli in optical recordings of the honeybee brain
  Pages: 85-95... Full Text
• Utz J. Pape, Holger Klein, Martin Vingron
  Statistical detection of cooperative transcription factors with similarity adjustment
  Pages: 96-105... Full Text
• Lukas Windhager, Ralf Zimmer
  Intuitive modeling of dynamic systems with Petri nets and fuzzy logic
  Pages: 106-115... Full Text
• Michael Seifert, Jens Keilwagen, Marc Strickert, Ivo Grosse
  Utilizing promoter pair orientations for HMM-based analysis of chip-chip data
  Pages: 116-127... Full Text
• Thomas Zichner, Zelmina Lubovac, Björn Olsson
  Temporal analysis of oncogenesis using microrna expression data
  Pages: 128-137... Full Text
• Birgit Moeller, Oliver Gress, Stefan Posch
  A comparative study of robust feature detectors for 2D electrophoresis gel image registration
  Pages: 138-147... Full Text
• Kristian Kaufmann, Jens Meiler
  Small molecules as rotamers: generation and docking in rosettaligand
  Pages: 148-157... Full Text
• Sebastian J. Schulthei, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch
  KIRMES: kernel-based identification of regulatory modules in euchromatic sequences
  Pages: 158-167... Full Text
• Markus Riester, Peter Stadler, Konstantin Klemm
  Franz: fast reconstruction of wild pedigrees
  Pages: 168-177... Full Text
• Wolfgang Otto, Sebastian Will, Rolf Backofen
  Structural local multiple alignment of RNA
  Pages: 178-188... Full Text
• Steffen Heyne, Sebastian Will, Michael Beckstette, Rolf Backofen
  Lightweight comparison of rnas based on exact sequence-structure matches
  Pages: 189-199... Full Text

Gesellschaft für Informatik, Bonn
ISBN 978-3-88579-226-0