German conference on bioinformatics 2010

Gesellschaft für Informatik, Bonn
2010

Contents

Articles

• Andreas R. Gruber, Stephan H. Bernhart, You Zhou, Ivo L. Hofacker
  Rnalfoldz: efficient prediction of thermodynamically stable, local secondary structures
  Pages: 11-20... Full Text
• Florian Battke, Stephan Körner, Steffen Hüttner, Kay Nieselt
  Efficient sequence clustering for RNA-seq data without a reference genome
  Pages: 21-30... Full Text
• Florian Blöchl, Maria L. Hartsperger, Volker Stümpflen, Fabian J. Theis
  Uncovering the structure of heterogenous biological data: fuzzy graph partitioning in the k-partite setting
  Pages: 31-40... Full Text
• Sergiy Bogomolov, Martin Mann, Björn Voß, Andreas Podelski, Rolf Backofen
  Shape-based barrier estimation for rnas
  Pages: 41-50... Full Text
• Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier
  Efficient similarity retrieval of protein binding sites based on histogram comparison
  Pages: 51-60... Full Text
• Peter Husemann, Jens Stoye
  Repeat-aware comparative genome assembly
  Pages: 61-70... Full Text
• Katrin Bohl, Luís F. De Figueiredo, Oliver Hädicke, Steffen Klamt, Christian Kost, Stefan Schuster, Christoph Kaleta
  CASOP GS: computing intervention strategies targeted at production improvement in genome-scale metabolic networks
  Pages: 71-80... Full Text
• Jan Grau, Daniel Arend, Ivo Grosse, Artemis G. Hatzigeorgiou, Jens Keilwagen, Manolis Maragkakis, Claus Weinholdt, Stefan Posch
  Predicting mirna targets utilizing an extended profile HMM
  Pages: 81-92... Full Text
• Arli A. Parikesit, Peter F. Stadler, Sonja J. Prohaska
  Quantitative comparison of genomic-wide protein domain distributions
  Pages: 93-102... Full Text
• Jan Budczies, Carsten Denkert, Berit M. Müller, Scarlet F. Brockmöller, Manfred Dietel, Jules L. Griffin, Matej Oresic, Oliver Fiehn
  Metatarget - extracting key enzymes of metabolic regulation from high-throughput metabolomics data using KEGG REACTION information
  Pages: 103-112... Full Text
• Andreas Gogol-Döring, Wei Chen
  Finding optimal sets of enriched regions in chip-seq data
  Pages: 113-121... Full Text
• Enrico Glaab, Jonathan M. Garibaldi, Natalio Krasnogor
  Learning pathway-based decision rules to classify microarray cancer samples
  Pages: 123-134... Full Text

Gesellschaft für Informatik, Bonn
ISBN 978-3-88579-267-3